Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015853805.1_cds_XP_016512374.1_25023

CDS Infomation

[gene=LOC107829423] [db_xref=GeneID:107829423] [protein=probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5] [partial=3'] [protein_id=XP_016512374.1] [location=106682..>109135] [gbkey=CDS]

Sequence

ATGGGAGCTGAAGTTGAAGAAGATGGGTTAAAGAAATTAGAGTATCTTTCACTAGTTTCA
AAGGTTTGTTCAGAGCTGGAGACCCATTTAGGGTTCGGTGATAAAGTATTAGCTGAGTTT
ATTACGGAGCTTGGTCGAAAGTGCGACACAGTGGACGAATTTGATGGGAAATTGAAAGAA
AATGGTGCTGAAATGCCCGATTATTTTGTCCGCACTTTATTGACGATTATTCATGCAATT
TTGCCTCCTAAGGTGAAGTCCAAGTCAGAGAATGAGTTGAGTAAGGATGACTCTGAATTT
TCGGCATTGAAAATTAGGGATGATAGAGATAGAGTGAAGGAATTAGAGAAGGAGATTGAG
TTGGAGGCAAAGAGTAAGAGGGGGAAGGATGAGGAAGAAGATTTTGATAAGAATAGGCGT
GACAGGAGGCGAGAGAGGGATCGAGATGATAGAAGAGAACGGGGCAAGGATAGGGATAGG
GATAGGGATAGGGATAGGGATAGGGATAGGGATAGGGGTAGGGATAGAGAGATGGATAGA
GACTGGGATAATCATGGTGATGATAGAGGTGAATATAAGGGCCGGGAAAGGCATAGGGAT
AGGGAGCGGGACAAGAATAAATATGAGAAGAATAGGAGAGATGGGTATGGGGAAGGCGAG
GAGGATGATATGAGGTCTGGGAGGCATCAGGACAGGAATAAGTATGAGAAGAACAGAAGA
GATGGGTATGAGGAGGATGGGAATGATGAAAGAAGGAAGGGGAGGTATCCGTCGGATGAA
CTTGAGTTGTATGGAGTGTATAAGGGGAGGGTGTCGAGGGTGATGGATTCTGGTTGTTTT
GTTCAGCTGAATGATTTTAGGGGGAAAGAGGGGTTGGTGCATGTTTCCCAGCTTGCTACT
AGAAGGGTTTCAAATGCAAAAGATTTAGTAAAGCGTGACCAGGAGGTTTATGTGAAGGTG
ATCTCTATTAGTGGGCAGAAGCTGAGTCTGTCGATGAGAGATGTTGATCAGAATACTGGA
AGGGATTTGTTGCCATTGAAGAAGAGCTCGGATGATGATGGATTGAGGGCGAATCCTTCG
GGGATGAACAGTGAGGGTTCCAAGACAAGGATTGGTCTTTCAGGTATCAGGATTAAAGAG
GAGGAAGATGTTGTTCCATCACGTCGACCATTGAAGAGAATGAGTTCTCCCGAAATATGG
GAAGCAAAACAACTCATAGCTGCAGGTGTTATGAGTGTAAAGGAATTTCCTATGTTTGAT
GAAGAAGGGGATGGGGTGCTATATCAGGAAGAGGGTGCGGAAGAAGAGCTTGAGATTGAG
TTGAATGAAGATGAACCCCCTTTCCTGCAAGGTCAGAGTCGGTATTCAGTGGATATGTCC
CCTGTTAAAATTTTTAAAAATCCTGAAGGATCCTTGAGTCGTGCTGCTGCACTTCAATCA
GCTTTGATTAAAGAGAGAAGAGAAGTGAGGGAACAGCAACAAAGAACAATGCTTGATTCC
ATCCCGAAGGATCTTAACAGACCATGGGAAGACCCAATGCCGGAGACTGGTGAGAGACAT
CTGGCACAGGAGTTGAGGGGTGTTGGTTTATCTGCCTATGATATGCCAGAATGGAAAAAG
GATGCTTATGGTAAAGCCTTGACCTTTGGGCAGAGGTCTAAACTATCTCTCCAGGAGCAG
AGGAAGAGCCTTCCAATTTACAAGTTGAAGAATGAACTGGTACAGGCTGTCCATGATAAT
CAGGTCCTTGTCGTCATTGGTGAGACAGGTTCTGGCAAGACAACACAGGTGACACAGTAT
TTAGCTGAGGCAGGGTATACAACAAAGGGCAAAATTGGATGTACTCAACCTCGTCGAGTG
GCTGCTATGTCAGTGGCTAAGAGAGTTGCTGAGGAATTTGGTTGTCGTTTAGGGGAAGAA
GTTGGTTATGCTATCCGTTTCGAAGATTGTACTGGACCAGAAACTGTTATAAAGTATATG
ACTGATGGTATGCTTCTGAGGGAGATTTTGATTGATGAAAATTTGTCCCAGTATTCAGTC
GTAATGCTCGATGAAGCGCACGAGAGAACCATTCACACTGATGTTCTCTTCGGACTGCTT
AAGCAACTTGTGAAGAGGAGACCTGACCTCCGTCTGATAGTCACATCTGCAACCTTGGAT
GCAGAGAAATTTTCTGGATATTTCTTCAACTGTAACATCTTTACAATTCCAGGAAGAACT
TTTCCAGTAGAGGTGCTTTACACTAAACAACCAGAAAGCGATTACCTTGATGCAGCTTTA
ATCACTGTACTACAGATCCACTTGACAGAACCTGAAGGTGACGTCCTCCTTTTCCTGACT
GGTCAAGAGGAGATTGATTATGCTTGCCAGTGTCTGTACGAGAGGATGAAAGGGCTAGGT
AAAAATGTTCCTGAACTGATTATTTTACCTGTCTATAGTGCTCTGCCNGGCGCC

Peptide Sequence

PEP ID

XP_016512374.1

PEP Infomation

PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5, partial [Nicotiana tabacum]

Sequence

MGAEVEEDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITELGRKCDTVDEFDGKLKE
NGAEMPDYFVRTLLTIIHAILPPKVKSKSENELSKDDSEFSALKIRDDRDRVKELEKEIE
LEAKSKRGKDEEEDFDKNRRDRRRERDRDDRRERGKDRDRDRDRDRDRDRDRGRDREMDR
DWDNHGDDRGEYKGRERHRDRERDKNKYEKNRRDGYGEGEEDDMRSGRHQDRNKYEKNRR
DGYEEDGNDERRKGRYPSDELELYGVYKGRVSRVMDSGCFVQLNDFRGKEGLVHVSQLAT
RRVSNAKDLVKRDQEVYVKVISISGQKLSLSMRDVDQNTGRDLLPLKKSSDDDGLRANPS
GMNSEGSKTRIGLSGIRIKEEEDVVPSRRPLKRMSSPEIWEAKQLIAAGVMSVKEFPMFD
EEGDGVLYQEEGAEEELEIELNEDEPPFLQGQSRYSVDMSPVKIFKNPEGSLSRAAALQS
ALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKK
DAYGKALTFGQRSKLSLQEQRKSLPIYKLKNELVQAVHDNQVLVVIGETGSGKTTQVTQY
LAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYM
TDGMLLREILIDENLSQYSVVMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLD
AEKFSGYFFNCNIFTIPGRTFPVEVLYTKQPESDYLDAALITVLQIHLTEPEGDVLLFLT
GQEEIDYACQCLYERMKGLGKNVPELIILPVYSALPGA

Transcript Sequence

Gene sequence data has not been registered.